Human Phenotype Ontology


The Human Phenotype Ontology table provides information on the disease phenotypes associated with a particular gene.

Gene: CAT

Cytoband position: 11p13

OMIM: 115500

RVIS score: -0.31

RVIS percentage: 32.15

Phenotype name HPO ID Alternative HPO ID Phenotype description
Abnormality of head or neck HP:0000152 None An abnormality of head and neck.
Abnormality of the mouth HP:0000153 None An abnormality of the mouth.
Oral ulcer HP:0000155 None Erosion of the mucous mebrane of the mouth with local excavation of the surface, resulting from the sloughing of inflammatory necrotic tissue.
Abnormal oral cavity morphology HP:0000163 None Abnormality of the oral cavity, i.e., the opening or hollow part of the mouth.
Abnormality of the dentition HP:0000164 HP:0006348 Any abnormality of the teeth.
Severe periodontitis HP:0000166 None A severe form of periodontitis.
Vitiligo HP:0001045 None None
Abnormal bleeding HP:0001892 HP:0008183 An abnormal susceptibility to bleeding, often referred to as a bleeding diathesis. A bleeding diathesis may be related to vascular, platelet and coagulation defects.
Anemia HP:0001903 HP:0005509 A reduction in erythrocytes volume or hemoglobin concentration.
Microcytic anemia HP:0001935 None A kind of anemia in which the volume of the red blood cells is reduced.
Abnormality of the respiratory system HP:0002086 None An abnormality of the respiratory system, which include the airways, lungs, and the respiratory muscles.
Abnormality of the upper respiratory tract HP:0002087 None An abnormality of the upper respiratory tract.
Neoplasm of the larynx HP:0100605 None None
Neoplasm of the respiratory system HP:0100606 None A tumor (abnormal growth of tissue) of the respiratory system.
Type I diabetes mellitus HP:0100651 None A chronic condition in which the pancreas produces little or no insulin. Type I diabetes mellitus is manifested by the sudden onset of severe hyperglycemia with rapid progression to diabetic ketoacidosis unless treated with insulin.
Schizophrenia HP:0100753 None A mental disorder characterized by a disintegration of thought processes and of emotional responsiveness. It most commonly manifests as auditory hallucinations, paranoid or bizarre delusions, or disorganized speech and thinking, and it is accompanied by significant social or occupational dysfunction. The onset of symptoms typically occurs in young adulthood, with a global lifetime prevalence of about 0.3-0.7%.
Gangrene HP:0100758 None A serious and potentially life-threatening condition that arises when a considerable mass of body tissue dies (necrosis).
Abnormality of the vasculature HP:0002597 None An abnormality of the vasculature.
Neoplasm HP:0002664 HP:0006741 An organ or organ-system abnormality that consists of uncontrolled autonomous cell-proliferation which can occur in any part of the body as a benign or malignant neoplasm (tumour).
Abnormality of the immune system HP:0002715 HP:0010986 An abnormality of the immune system.
Type II diabetes mellitus HP:0005978 HP:0100652 A type of diabetes mellitus initially characterized by insulin resistance and hyperinsulinemia and subsequently by glucose interolerance and hyperglycemia.
Premature loss of permanent teeth HP:0006357 None Premature loss of the permanent teeth.
Premature loss of teeth HP:0006480 HP:0006343 Exfoliation of a tooth more than 2 SD earlier than the normal age for the deciduous teeth and not related to traume or neglect. Exfoliation of a permanent tooth is per se abnormal.
Old-aged sensorineural hearing impairment HP:0040113 None None
Abnormal vascular morphology HP:0025015 None None
Constitutional symptom HP:0025142 None A symptom or manifestation indicating a systemic or general effect of a disease and that may affect the general well-being or status of an individual.
Anemia of inadequate production HP:0010972 HP:0005553 A kind of anemia characterized by inadequate production of erythrocytes.
Abnormality of immune system physiology HP:0010978 None A functional abnormality of the immune system.
Abnormal systemic arterial morphology HP:0011004 HP:0005114 An abnormality of the systemic arterial tree, which consists of the aorta and other systemic arteries.
Abnormal glucose homeostasis HP:0011014 None Abnormality of glucose homeostasis.
Abnormality of skin morphology HP:0011121 None Any morphological abnormality of the skin.
Functional abnormality of the inner ear HP:0011389 None An abnormality of the function of the inner ear.
Abnormal central motor function HP:0011442 None An anomaly of the control or production of movement in the central nervous system.
Neoplasm by anatomical site HP:0011793 None Neoplasm categorized according to the anatomical site of origin of the neoplasm.
Abnormal oral mucosa morphology HP:0011830 None Abnormality of the oral mucosa.
Abnormal respiratory system morphology HP:0012252 None A structural anomaly of the respiratory system.
Abnormal homeostasis HP:0012337 None An anomaly in the processes involved in the maintenance of an internal equilibrium.
Abnormal enzyme/coenzyme activity HP:0012379 None An altered ability of any enzyme or their cofactors to act as catalysts. This term includes changes due to altered levels of an enzyme.
Abnormality of cardiovascular system morphology HP:0030680 HP:0002565 Any structural anomaly of the heart and great vessels.
Abnormal ear physiology HP:0031704 None Any functional anomaly of the ear.
Abnormal oral morphology HP:0031816 None Any structural anomaly of the mouth, which is also known as the oral cavity.
Abnormality of the gingiva HP:0000168 None Any abnormality of the gingiva (also known as gums).
Gingival bleeding HP:0000225 HP:0000167 Hemorrhage affecting the gingiva.
Gingivitis HP:0000230 None Inflammation of the gingiva.
Abnormality of the head HP:0000234 None An abnormality of the head.
Abnormality of the face HP:0000271 None An abnormality of the face.
Hearing abnormality HP:0000364 None An abnormality of the sensory perception of sound.
Hearing impairment HP:0000365 HP:0008563 A decreased magnitude of the sensory perception of sound.
Sensorineural hearing impairment HP:0000407 HP:0008614 A type of hearing impairment in one or both ears related to an abnormal functionality of the cochlear nerve.
Abnormal blood vessel morphology HP:0033353 None Any structural anomaly of a blood vessel (artery, arteriole, capillary, venule, or vein).
Abnormality of the ear HP:0000598 None An abnormality of the ear.
Periodontitis HP:0000704 HP:0006301 Inflammation of the periodontium.
Abnormality of the nervous system HP:0000707 HP:0006987 An abnormality of the nervous system.
Behavioral abnormality HP:0000708 HP:0002456 An abnormality of mental functioning including various affective, behavioural, cognitive and perceptual abnormalities.
Abnormality of the endocrine system HP:0000818 None An abnormality of the endocrine system.
Diabetes mellitus HP:0000819 HP:0008260 A group of abnormalities characterized by hyperglycemia and glucose intolerance.
Abnormality of the skin HP:0000951 HP:0007580 An abnormality of the skin.
Abnormality of skin pigmentation HP:0001000 HP:0200045 An abnormality of the pigmentation of the skin.
Reduced catalase level HP:0012517 None An abnormally decreased amount of catalase level.
Abnormality of the integument HP:0001574 None An abnormality of the integument, which consists of the skin and the superficial fascia.
Abnormality of the larynx HP:0001600 None An abnormality of the larynx.
Abnormality of the cardiovascular system HP:0001626 None Any abnormality of the cardiovascular system.
Abnormality of blood and blood-forming tissues HP:0001871 HP:0003135 An abnormality of the hematopoietic system.
Abnormal erythrocyte morphology HP:0001877 HP:0010973 Any structural abnormality of erythrocytes (red-blood cells).
Abnormality of metabolism/homeostasis HP:0001939 HP:0004367 None
Abnormal nervous system physiology HP:0012638 None A functional anomaly of the nervous system.
Abnormal inflammatory response HP:0012647 None Any anomaly of the inflammatory response, a response to injury or infection characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.
Increased inflammatory response HP:0012649 None A abnormal increase in the inflammatory response to injury or infection.
Autosomal recessive inheritance HP:0000007 HP:0001526 A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in individuals with two pathogenic alleles, either homozygotes (two copies of the same mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele).
Parkinsonism HP:0001300 None Characteristic neurologic anomaly resulting from degeneration of dopamine-generating cells in the substantia nigra, a region of the midbrain, characterized clinically by shaking, rigidity, slowness of movement and difficulty with walking and gait.
Abnormality of extrapyramidal motor function HP:0002071 HP:0007113 A neurological condition related to lesions of the basal ganglia leading to typical abnormalities including akinesia (inability to initiate changes in activity and perform volitional movements rapidly and easily), muscular rigidity (continuous contraction of muscles with constant resistance to passive movement), chorea (widespread arrhythmic movements of a forcible, rapid, jerky, and restless nature), athetosis (inability to sustain the muscles of the fingers, toes, or other group of muscles in a fixed position), and akathisia (inability to remain motionless).
Pain HP:0012531 None An unpleasant sensory and emotional experience associated with actual or potential tissue damage, or described in terms of such damage.
Glucose intolerance HP:0001952 HP:0000833 Glucose intolerance (GI) can be defined as dysglycemia that comprises both prediabetes and diabetes. It includes the conditions of impaired fasting glucose (IFG) and impaired glucose tolerance (IGT) and diabetes mellitus (DM).
Arteriosclerosis HP:0002634 None Sclerosis (hardening) of the arteries with increased thickness of the wall of arteries as well as increased stiffness and a loss of elasticity.