Human Phenotype Ontology


The Human Phenotype Ontology table provides information on the disease phenotypes associated with a particular gene.

Gene: IL1B

Cytoband position: 2q14.1

OMIM: 147720

RVIS score: -0.38

RVIS percentage: 27.42

Phenotype name HPO ID Alternative HPO ID Phenotype description
Abnormality of head or neck HP:0000152 None An abnormality of head and neck.
Abnormality of the mouth HP:0000153 None An abnormality of the mouth.
Abnormal lip morphology HP:0000159 None An abnormality of the lip.
Abnormal oral cavity morphology HP:0000163 None Abnormality of the oral cavity, i.e., the opening or hollow part of the mouth.
Abnormal palate morphology HP:0000174 None Any abnormality of the palate, i.e., of roof of the mouth.
Cleft palate HP:0000175 HP:0410004 Cleft palate is a developmental defect of the palate resulting from a failure of fusion of the palatine processes and manifesting as a separation of the roof of the mouth (soft and hard palate).
Abnormality of upper lip HP:0000177 None An abnormality of the upper lip.
Oral cleft HP:0000202 None The presence of a cleft in the oral cavity, the two main types of which are cleft lip and cleft palate. In cleft lip, there is the congenital failure of the maxillary and median nasal processes to fuse, forming a groove or fissure in the lip. In cleft palate, there is a congenital failure of the palate to fuse properly, forming a grooved depression or fissure in the roof of the mouth. Clefts of the lip and palate can occur individually or together. It is preferable to code each defect separately.
Cleft upper lip HP:0000204 None A gap in the upper lip. This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development.
Abnormality of the head HP:0000234 None An abnormality of the head.
Abnormality of the face HP:0000271 None An abnormality of the face.
Cleft lip HP:0410030 None A gap in the lip or lips.
Abnormal hard palate morphology HP:0100737 None None
Abnormal stomach morphology HP:0002577 None An abnormality of the stomach.
Chronic atrophic gastritis HP:0002582 None A form of chronic gastritis associated with atrophic gastric mucous membrane.
Neoplasm HP:0002664 HP:0006741 An organ or organ-system abnormality that consists of uncontrolled autonomous cell-proliferation which can occur in any part of the body as a benign or malignant neoplasm (tumour).
Abnormality of the gastric mucosa HP:0004295 None An abnormality of the gastric mucous membrane.
Chronic gastritis HP:0005231 None A chronic form of gastritis.
Gastritis HP:0005263 None The presence of inflammation of the gastric mucous membrane.
Neoplasm of the stomach HP:0006753 None A tumor (abnormal growth of tissue) of the stomach.
Abnormality of the digestive system HP:0025031 None None
Neoplasm of the gastrointestinal tract HP:0007378 None A tumor (abnormal growth of tissue) of the gastrointestinal tract.
Abnormality of the gastrointestinal tract HP:0011024 None An abnormality of the gastrointestinal tract.
Neoplasm by anatomical site HP:0011793 None Neoplasm categorized according to the anatomical site of origin of the neoplasm.
Stomach cancer HP:0012126 None A cancer arising in any part of the stomach.
Morphological abnormality of the gastrointestinal tract HP:0012718 None Abnormal structure of the gastrointestinal tract.
Abnormal oral morphology HP:0031816 None Any structural anomaly of the mouth, which is also known as the oral cavity.
Autosomal dominant inheritance HP:0000006 HP:0001463 A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele.
Abnormality of digestive system morphology HP:0025033 None A structural anomaly of the digestive system.