Gibson et al., 2008
|
CP |
Diplegia |
NOS3
|
-1.10 |
rs1800779
|
G |
A |
SNV |
0.03000000 |
0.500 |
Mei et al., 2021
|
CP |
None |
KCNQ2
|
-0.67 |
NM_172107.4:c.1527delA
|
CT |
C |
DEL |
None |
None |
Esih et al., 2021
|
NESHIE |
Normal magnetic resonance imaging presentation |
CAT
|
-0.31 |
rs1001179
|
C |
T |
SNV |
0.03400000 |
0.390 |
Moreno-De-Luca et al., 2021
|
CP |
None |
GNAO1
|
-0.74 |
NM_020988:c.724-8G>A
|
G |
A |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
KIF1A
|
-3.67 |
rs1057518226
|
C |
T |
SNV |
None |
None |
Harteman et al., 2013
|
NESHIE |
White matter/watershed brain injury |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
<0.05000000 |
3.700 |
Wu et al., 2009
|
CP |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.03000000 |
1.400 |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia, possible periventricular leukomalacia |
KANK1
|
-0.92 |
NM_153186.5:c.2515G>C
|
G |
C |
SNV |
None |
None |
Wu et al., 2009
|
CP |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.00100000 |
2.600 |
Wang et al., 2024
|
CP |
None |
CDKL5
|
-0.67 |
rs61753251
|
CT |
- |
DEL |
None |
None |
Gibson et al., 2008
|
CP |
Diplegia |
NOS3
|
-1.10 |
rs1800779
|
G |
A |
SNV |
0.03000000 |
0.660 |
Wang et al., 2024
|
CP |
None |
DUOX2
|
0.23 |
rs147540920
|
C |
A |
SNV |
None |
None |
Thys et al., 2024
|
CP |
Spastic diplegia, Intellectual disability, Developmental disorder |
KIF1A
|
-3.67 |
rs1553638086
|
G |
A |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
GNAO1
|
-0.74 |
rs539662922
|
C |
T |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
NESHIE; spastic quadriplegia, dykinesia, seizures, diagnosed neonatal encephalopathy |
KANK1
|
-0.92 |
NM_153186.5:c.2584G>A
|
G |
A |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845:c.3977G>T
|
C |
A |
SNV |
None |
None |
Gabriel et al., 2016
|
NESHIE |
Reduced periventricular leukomalacia risk |
TNF
|
-0.03 |
rs1799964
|
T |
C |
SNV |
0.04400000 |
0.408 |
Jin et al., 2020
|
CP |
None |
NR1I2
|
-0.55 |
NM_022002.2:c.1172-1G>T
|
G |
T |
Splicing |
None |
None |
van Eyk et al., 2019
|
CP |
Developmental delay, epilepsy |
KANK1
|
-0.92 |
NM_153186.5:c.316C>T
|
C |
T |
SNV |
None |
None |
Thys et al., 2024
|
CP |
Epileptic encephalopathy, dystonia, feeding difficulties, Developmental disorder, Intellectual disability |
KCNQ2
|
-0.67 |
NM_172107.4:c.881C>T
|
G |
A |
SNV |
None |
None |
Pingel et al., 2018
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845.4:c.3607C>G
|
G |
C |
SNV |
None |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs1800896
|
T |
C |
SNV |
0.00600000 |
2.881 |
Thys et al., 2024
|
CP |
Developmental disorder, epilepsy, spastic diplegia |
KIF1A
|
-3.67 |
rs548204329
|
G |
A |
SNV |
None |
None |
Woodward et al., 2023
|
NESHIE |
Cystic fibrosis confirmed in patient following genetic testing |
CFTR
|
-0.51 |
rs78655421
|
G |
A |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic/dystonic diplegia, neonatal encephalopathy, developmental delay, seizure, cerebral oedema |
KANK1
|
-0.92 |
NM_153186.5:c.2398G>A
|
G |
A |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
PTPN11
|
-0.43 |
NM_002834.5:c.1387A>G
|
A |
G |
SNV |
None |
None |
Gibson et al., 2006
|
CP |
Quadriplegia, gestational age >= 37 weeks |
TNF
|
-0.03 |
rs1800629
|
G |
A |
SNV |
0.02000000 |
1.820 |
Bi et al., 2014
|
CP |
None |
IL6
|
0.73 |
rs2069832
|
A |
G |
SNV |
0.02000000 |
2.700 |
Hou et al., 2016
|
CP |
TNF-a levels |
TNF
|
-0.03 |
rs361525
|
G |
A |
SNV |
<0.05000000 |
None |
Esih et al., 2021
|
NESHIE |
Less white matter damage |
IL1B
|
-0.38 |
rs1071676
|
C |
G |
SNV |
0.01100000 |
0.180 |
Kuzmanic Samija et al., 2014
|
NESHIE |
Abnormal magnetic resonance imaging |
NOS3
|
-1.10 |
rs1808593
|
G |
T |
SNV |
0.01040000 |
6.572 |
Khankhanian et al., 2013
|
CP |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.03000000 |
2.500 |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs1800871
|
A |
G |
SNV |
0.00300000 |
0.549 |
Bi et al., 2014
|
CP |
Male, Spastic |
IL6
|
0.73 |
rs2066992
|
G |
T |
SNV |
0.04100000 |
None |
Xia et al., 2018
|
CP |
None |
IL10
|
0.04 |
rs3024490
|
A |
T |
SNV |
0.03300000 |
0.702 |
McMichael et al., 2015
|
CP |
Hemiplegia, epilepsy |
KANK1
|
-0.92 |
NM_153186:c.243C>G
|
C |
G |
SNV |
None |
None |
Bi et al., 2016
|
CP |
None |
COL4A1
|
-2.82 |
rs1961495
|
C |
T |
SNV |
0.04670000 |
1.387 |
Gabriel et al., 2016
|
NESHIE |
Reduced periventricular leukomalacia risk |
IL10
|
0.04 |
rs1800896
|
T |
C |
SNV |
<0.00010000 |
0.074 |
Mei et al., 2021
|
CP |
None |
SCN1A
|
-1.43 |
NM_001165963.4:c.4112G>A
|
C |
T |
SNV |
None |
None |
Mei et al., 2021
|
CP |
None |
KCNQ2
|
-0.67 |
NM_172107.4:c.172C>A
|
G |
T |
SNV |
None |
None |
Thys et al., 2024
|
CP |
Spastic quadriplegia, lesional epilepsy, Developmental disorder, Intellectual disability, dysarthria. Father was later diagnosed with microscopic hematuria, otherwise asymptomatic. |
COL4A1
|
-2.82 |
NM_001845.6:c.1728_1738delinsCCAAGGG
|
- |
TACAGAACCCTGATGTGAGAAGAAGAAAAAGACACCGTTATCAGAGACACACCAACACCCTGTCCTTATCGCATTCTTCTGACATTTGTGGTCAATAAGTACTAGAGTTAACTGGCTCACACTATTTATTTACTTCATCTACCCTCCCAGGAGGGCCACCTTGTAGTTAATAAGTGAAACCAGCATTCTTCTCCCTAAGCTGAGCATTCTTCCTCCCTCATCTACTTAGGGAGATACTTTAGAGAATGAGATGTTGATACCTGGAATCTTTTGAAAACAATGACATGAATACTATTAACTTTAGATTTCACCTCCCATCCAAAGCAAAAAGATACACAAACACATCTGTTCAGTTCCCCCAAATGCATCAGAAGACACTGATCTGTTATCACCTAATTATTTGTCAATAATAACTGGCAATGCCTAGGTTTATAGACTTAAGTTGTTCCATGAACCATGAATCATGAAACAAGTTCATTTGTGCCATCATCAAGGAGATAGAAATACATCAATATGATTCAAATTACTCATTTCTCAATGCTTTGCAGATCCACACTGTAAAATGCACATTCAAAGTCTGGAGATAAACATACC:CCTTGG |
INS |
None |
None |
Gibson et al., 2008
|
CP |
Girls |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
0.00900000 |
1.740 |
van Eyk et al., 2019
|
CP |
NESHIE; dyskinetic mixed diplegia, seizures |
NR1I2
|
-0.55 |
NM_003889.3:c.1087G>A
|
G |
A |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
PHIP
|
-1.24 |
rs771126523
|
TTTAT |
- |
DEL |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia |
COL4A1
|
-2.82 |
NM_001845.6:c.4516A>G
|
T |
C |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia, possible periventricular leukomalacia |
KANK1
|
-0.92 |
NM_153186.5:c.2515G>C
|
G |
C |
SNV |
None |
None |
van Eyk et al., 2021
|
CP |
NESHIE; spastic quadriplegia, dykinesia, seizures |
COL4A4
|
1.04 |
NM_000092.5:c.4720C>T
|
G |
A |
SNV |
None |
None |
Parobek et al., 2024
|
NESHIE |
None |
ACTA1
|
-0.30 |
rs1659975786
|
C |
T |
SNV |
None |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs1800871
|
A |
G |
SNV |
0.01200000 |
None |
Kuzmanic Samija et al., 2011
|
NESHIE |
None |
NOS3
|
-1.10 |
rs1808593
|
G |
T |
SNV |
0.00800000 |
9.625 |
May et al., 2021
|
CP |
Birth asphyxia; generalised dystonia, spastic bilateral CP |
PANK2
|
-0.23 |
NM_153638.3:c.1412+1G>C
|
G |
C |
SNV |
None |
None |
Gibson et al., 2005
|
CP |
Protective for diplegia, 32-36 weeks gestation |
MTHFR
|
0.09 |
rs1801131
|
T |
G |
SNV |
<0.05000000 |
0.160 |
van Eyk et al., 2019
|
CP |
Spastic/dystonic quadriplegia |
KANK1
|
-0.92 |
NM_153186.5:c.3005G>A
|
G |
A |
SNV |
None |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs1518111
|
T |
C |
SNV |
0.00900000 |
1.696 |
Bi et al., 2014
|
CP |
Male, Spastic |
IL6
|
0.73 |
rs2069837
|
A |
G |
SNV |
0.02100000 |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
GNAO1
|
-0.74 |
NM_020988:c.736G>A
|
G |
A |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
KIF1A
|
-3.67 |
rs1553639011
|
T |
G |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
KIF1A
|
-3.67 |
NM_001244008.1:c.2977+2T>C
|
A |
G |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
DUOX2
|
0.23 |
NM_001363711.2:c.2202G>A
|
C |
T |
SNV |
None |
None |
Wu et al., 2011
|
CP |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
<0.00100000 |
2.170 |
Gibson et al., 2008
|
CP |
Diplegia |
NOS3
|
-1.10 |
rs1800779
|
G |
A |
SNV |
0.03000000 |
0.660 |
Gabriel et al., 2016
|
NESHIE |
Periventricular leukomalacia |
IL10
|
0.04 |
rs1800896
|
T |
C |
SNV |
<0.00010000 |
13.500 |
Wang et al., 2024
|
CP |
None |
KIF1A
|
-3.67 |
rs879253888
|
G |
A |
SNV |
None |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs1554286
|
A |
T |
SNV |
0.01500000 |
0.612 |
Woodward et al., 2023
|
NESHIE |
None |
ISY1
|
-0.10 |
ISY1:c.607+G>A
|
None |
None |
None |
None |
None |
Woodward et al., 2023
|
NESHIE |
Congenital adrenal hypoplasia confirmed in patient following genetic testing |
CYP21A2
|
None |
rs6471
|
G |
C |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
KIF1A
|
-3.67 |
rs876661202
|
G |
C |
SNV |
None |
None |
Mei et al., 2021
|
CP |
None |
KCNQ2
|
-0.67 |
rs587777219
|
G |
A |
SNV |
None |
None |
Almansa et al., 2024
|
CP |
None |
COL4A1
|
-2.82 |
rs2139156247
|
C |
T |
SNV |
None |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs3024490
|
A |
T |
SNV |
0.00600000 |
0.573 |
Mei et al., 2021
|
CP |
None |
DUOX2
|
0.23 |
rs181461079
|
C |
A |
SNV |
None |
None |
van Eyk et al., 2021
|
CP |
Spastic hemiplegia, epilepsy, developmental delay |
GNAO1
|
-0.74 |
NM_138736.3:c.951A>C
|
A |
C |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Choreoathetoid quadriplegia, cystic porencephaly, damage to small blood vessels with increased risk of haemorrhage, epileptic encephalopathy, seizure, developmental delay |
COL4A1
|
-2.82 |
NM_001845.6:c.2494G>A
|
C |
T |
SNV |
None |
None |
Thys et al., 2024
|
CP |
Spastic diplegia, Developmental disorder, epilepsy, Autism spectrum disorder |
KIF1A
|
-3.67 |
rs797045655
|
G |
A |
SNV |
None |
None |
Zhu et al., 2018
|
CP |
None |
KCNQ2
|
-0.67 |
rs201750561
|
C |
A |
SNV |
None |
None |
Thys et al., 2024
|
CP |
Spastic hemiplegia, Developmental disorder, Intellectual disability ventricular septum defect, laryngomalacia, feeding problems, microphtalmia, microcornea |
COL4A1
|
-2.82 |
rs1555303010
|
C |
T |
SNV |
None |
None |
Pavlov, et al., 2023
|
NESHIE |
None |
SERPINB2
|
0.20 |
rs6103
|
C |
G |
SNV |
0.01300000 |
3.800 |
Hou et al., 2016
|
CP |
None |
MTHFR
|
0.09 |
rs9651118
|
T |
C |
SNV |
<0.00100000 |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
SMARCB1
|
-0.34 |
NM_00307:c.110G>A
|
None |
None |
SNV |
None |
None |
Gibson et al., 2008
|
CP |
Diplegia |
NOS3
|
-1.10 |
rs1800779
|
G |
A |
SNV |
0.03000000 |
0.500 |
Wang et al., 2013
|
CP |
NESHIE |
AP4B1
|
-0.13 |
rs1217401
|
A |
G |
SNV |
0.04220000 |
0.470 |
Cheng et al., 2011
|
CP |
Mental retardation |
MTHFR
|
0.09 |
rs1476413
|
C |
T |
SNV |
0.02800000 |
None |
Cheng et al., 2011
|
CP |
Mental retardation |
MTHFR
|
0.09 |
rs4846049
|
T |
G |
SNV |
0.03100000 |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
MTFMT
|
0.71 |
rs201431517
|
G |
A |
SNV |
None |
None |
Gibson et al., 2005
|
CP |
Diplegia, < 32 weeks gestation |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
<0.05000000 |
2.760 |
Woodward et al., 2023
|
NESHIE |
None |
MTFMT
|
0.71 |
rs200286768
|
G |
A |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Female, spastic/dystonic diplegia, more dystonic than spastic with intermittent hypertonicity, born 35 weeks, BW: 10th percentile, SGA, microcephaly, developmental disorders and cortical visual impairment, MRI and X-Ray: Non-specific hyperintensity within the posterior parietal deep white matter, and in the cerebelli, posterior to the dentate nuclei. Bilateral cortical heterotopia in the inferior occipital horns. |
KIF1A
|
-3.67 |
rs672601370
|
G |
A |
SNV |
None |
None |
Parobek et al., 2024
|
NESHIE |
None |
GBE1
|
0.62 |
rs552094593
|
G |
A |
SNV |
None |
None |
Bi et al., 2014
|
CP |
Male, Spastic |
IL6
|
0.73 |
rs1800796
|
G |
C |
SNV |
0.02200000 |
None |
van Eyk et al., 2019
|
CP |
NESHIE; spastic quadriplegia, dykinesia, seizures, diagnosed neonatal encephalopathy |
DYNC2H1
|
-0.35 |
NM_001080463.1:c.3794G>A
|
G |
A |
SNV |
None |
None |
Esih et al., 2021
|
NESHIE |
Basal ganglia damage |
IL1B
|
-0.38 |
rs1143623
|
C |
G |
SNV |
0.03900000 |
3.960 |
Fehlings et al., 2024
|
CP |
Spastic hemiplegic CP with evidence of IVH/periventricular haemorrhagic infarction on MRI, toxic exposure |
COL4A1
|
-2.82 |
rs1594566006
|
A |
- |
DEL |
None |
None |
Gibson et al., 2005
|
CP |
Protective for quadriplegia |
MTHFR
|
0.09 |
rs1801131
|
T |
G |
SNV |
<0.05000000 |
0.330 |
Wu et al., 2016
|
NESHIE |
None |
NOS3
|
-1.10 |
rs2070744
|
C |
T |
SNV |
0.00900000 |
8.795 |
van Eyk et al., 2019
|
CP |
Spastic quadriplegia |
DYNC2H1
|
-0.35 |
NM_001377.3:c.9968C>G
|
C |
G |
SNV |
None |
None |
Fehlings et al., 2024
|
CP |
Unspecified CP Subtype, Down Syndrome, normal MRI, congenital malformation, prenatal growth restriction, intrapartum birth asphyxia, intrauterine infection, multiple fetuses, prolonged preterm premature rupture of membrane, family history of CP, prematurity |
PHIP
|
-1.24 |
NM_017934.7:c.2514_2517dup
|
G |
GCCAT |
DUP |
None |
None |
May et al., 2021
|
CP |
Birth asphyxia; spastic |
SMARCB1
|
-0.34 |
NM_003073.5:c.1121G>A
|
G |
A |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Developmental delay, epilepsy |
KANK1
|
-0.92 |
NM_153186.5:c.316C>T
|
C |
T |
SNV |
None |
None |
Esih et al., 2016
|
CP |
NESHIE |
CAT
|
-0.31 |
rs1001179
|
C |
T |
SNV |
0.02600000 |
3.360 |
Esih et al., 2021
|
NESHIE |
posterior limb of internal capsule damage |
IL1B
|
-0.38 |
rs1143623
|
C |
G |
SNV |
0.00900000 |
5.670 |
Wang et al., 2024
|
CP |
None |
COL4A1
|
-2.82 |
rs1877827904
|
G |
A |
SNV |
None |
None |
Esih et al., 2021
|
NESHIE |
Protective against moderate/severe magnetic resonance imaging presentation |
CARD8
|
1.18 |
rs2043211
|
A |
T |
SNV |
0.04000000 |
0.260 |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia |
NR1I2
|
-0.55 |
NM_033013.2:c.944-1G>T
|
G |
T |
Splicing |
None |
None |
Bi et al., 2014
|
CP |
Male |
IL6
|
0.73 |
rs2069837
|
A |
G |
SNV |
0.02700000 |
1.334 |
Moreno-De-Luca et al., 2021
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845:c.3611G>A
|
C |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845:c.2373_2383del
|
ACCCCACGGAG |
- |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
PHIP
|
-1.24 |
NM_017934.7:c.600+1G>-
|
None |
None |
None |
None |
None |
Wu et al., 2009
|
CP |
Controlling for race; clinical chorioamnionitis |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
<0.00010000 |
4.600 |
Thys et al., 2024
|
CP |
Spastic diplegia, Autism spectrum disorder, Attention deficit hyperactivity disorder, Developmental disorder, Intellectual disability. Father was similarly affected. |
KIF1A
|
-3.67 |
rs1057518760
|
C |
T |
SNV |
None |
None |
Parobek et al., 2024
|
NESHIE |
None |
DUOX2
|
0.23 |
rs181461079
|
C |
A |
SNV |
None |
None |
Pingel et al., 2018
|
CP |
None |
COL4A4
|
1.04 |
rs13027659
|
C |
T |
SNV |
None |
None |
van Eyk et al., 2021
|
CP |
NESHIE; spastic quadriplegia, dykinesia, seizures |
COL4A4
|
1.04 |
NM_000092.5: c.4720C>T
|
G |
A |
SNV |
None |
None |
Fehlings et al., 2024
|
CP |
Hemiplegic CP with predominant white matter injury on MRI, intrauterine infection, intrapartum birth asphyxia, maternal illness (Crohn's disease, low iron levels during pregnancy, neonatal encephalopathy), Other: meconium aspiration syndrome, persistent pulmonary hypertension, neonatal abstinence syndrome |
ZDHHC9
|
-0.12 |
NM_001008222.3:c.881+1G>T
|
C |
A |
SNV |
None |
None |
Fehlings et al., 2024
|
CP |
Right spastic hemiplegia, MRI shows basal ganglia and thalamus lesion with cortico-subcortical injury and focal porencephaly, congenital malformation, maternal illness: lupus, intrauterine growth restriction, placental abnormality (multiple clots) |
COL4A1
|
-2.82 |
rs672601347
|
C |
G |
SNV |
None |
None |
Bi et al., 2014
|
CP |
Male, Spastic |
IL6
|
0.73 |
rs2066992
|
G |
T |
SNV |
0.04000000 |
None |
Bi et al., 2014
|
CP |
Male |
IL6
|
0.73 |
rs2069837
|
A |
G |
SNV |
0.04100000 |
None |
Esih et al., 2021
|
NESHIE |
Protective against severe magnetic resonance imaging presentation |
CARD8
|
1.18 |
rs2043211
|
A |
T |
SNV |
0.04800000 |
None |
Wu et al., 2009
|
CP |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.03000000 |
1.400 |
Thys et al., 2024
|
CP |
Developmental disorder, Intellectual disability, spastic diplegia, Attention deficit hyperactivity disorder |
KIF1A
|
-3.67 |
rs1064795534
|
C |
T |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
KCNQ2
|
-0.67 |
NM_172107.4:c.881C>T
|
G |
A |
SNV |
None |
None |
Chopra et al., 2022
|
CP |
Spastic diplegic, cryptogenic (no predefined risk factors) |
GNAO1
|
-0.74 |
NM_020988.2:c.625C>T
|
C |
T |
SNV |
None |
None |
Torres-Merino et al., 2019
|
CP |
NESHIE |
IL1B
|
-0.38 |
rs16944
|
A |
G |
SNV |
0.01890000 |
2.633 |
Wu et al., 2009
|
CP |
Controlling for race |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.00400000 |
2.400 |
Xia et al., 2018
|
CP |
None |
IL10
|
0.04 |
rs1800896
|
T |
C |
SNV |
0.03300000 |
0.696 |
Hou et al., 2016
|
CP |
None |
TNF
|
-0.03 |
rs361525
|
G |
A |
SNV |
0.01000000 |
None |
Bi et al., 2016
|
CP |
Males |
COL4A1
|
-2.82 |
rs1411040
|
C |
T |
SNV |
0.03400000 |
2.042 |
van Eyk et al., 2019
|
CP |
None |
KANK1
|
-0.92 |
NM_153186.5:c.3569G>A
|
G |
A |
SNV |
None |
None |
Pingel et al., 2018
|
CP |
None |
COL4A1
|
-2.82 |
rs34004222
|
G |
A |
SNV |
None |
None |
Bi et al., 2014
|
CP |
Male, Spastic |
IL6
|
0.73 |
rs1800796
|
G |
C |
SNV |
0.02700000 |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
GNAO1
|
-0.74 |
NM_020988:c.625C>T
|
C |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
KIF1A
|
-3.67 |
rs797045164
|
G |
A |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845.6:c.2147del
|
CG |
C |
DEL |
None |
None |
Bi et al., 2014
|
CP |
None |
IL6
|
0.73 |
rs2069845
|
G |
A |
SNV |
0.09000000 |
2.300 |
Wang et al., 2024
|
CP |
None |
KCNQ2
|
-0.67 |
rs796052622
|
A |
G |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
KCNQ2
|
-0.67 |
rs397515420
|
T |
C |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic quadriplegia with generalised hypotonia, dystonic posture, intellectual disability, epilepsy, periventricular leukomalacia |
COL4A1
|
-2.82 |
NM_001845.6:c.2413G>A
|
C |
T |
SNV |
None |
None |
Parobek et al., 2024
|
NESHIE |
None |
DUOX2
|
0.23 |
NM_014080.4:c.3616G>A
|
C |
T |
SNV |
None |
None |
Gabriel et al., 2016
|
NESHIE |
Periventricular leukomalacia |
IL10
|
0.04 |
rs1800896
|
T |
C |
SNV |
0.03000000 |
1.962 |
Moreno-De-Luca et al., 2021
|
CP |
None |
CDKL5
|
-0.67 |
rs267608395
|
C |
T |
SNV |
None |
None |
Bi et al., 2014
|
CP |
Male, Spastic |
IL6
|
0.73 |
rs2069837
|
A |
G |
SNV |
0.02400000 |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
KIF1A
|
-3.67 |
rs1064793161
|
C |
T |
SNV |
None |
None |
Wu et al., 2009
|
CP |
Controlling for race; maternal age >= 35 |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
<0.00010000 |
2.500 |
McMichael et al., 2015
|
CP |
None |
ZDHHC9
|
-0.12 |
rs1177392425
|
C |
T |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
SCN1A
|
-1.43 |
rs1057521746
|
G |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
SCN1A
|
-1.43 |
NM_001165963:c.4172A>G
|
T |
C |
SNV |
None |
None |
Wang et al., 2013
|
CP |
NESHIE |
AP4B1
|
-0.13 |
rs1217401
|
A |
G |
SNV |
0.00000446 |
None |
Thys et al., 2024
|
CP |
Spastic quadriplegia, epilepsy, language developmental delay, dysarthria. Mother presented with hemorrhagic stroke at age <40y, leading to genetic testing in child. |
COL4A1
|
-2.82 |
NM_001845.6:c.1466-1G>A
|
C |
T |
SNV |
None |
None |
Fehlings et al., 2024
|
CP |
Dystonic CP and basal ganglia/thalamus lesions with cortical-subcortical lesion on MRI, intrauterine growth restriction, hyperbilirubinemia (high-intermediate risk level), neonatal hypoglycemia |
COL4A1
|
-2.82 |
rs2139162955
|
C |
T |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Developmental delay |
KANK1
|
-0.92 |
NM_153186.5:c.3290C>T
|
C |
T |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia |
EIF4E2
|
-0.34 |
NM_001276337.1:c.277C>T
|
C |
T |
SNV |
None |
None |
Bi et al., 2014
|
CP |
Premature rupture of membrane |
IL6
|
0.73 |
rs2066992
|
G |
T |
SNV |
0.01500000 |
None |
Almansa et al., 2024
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845.4:c.443G>A
|
C |
T |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic diplegia, neonatal seizures, developmental delay |
COL4A1
|
-2.82 |
NM_001845.6:c.2447C>T
|
G |
A |
SNV |
None |
None |
Gibson et al., 2005
|
CP |
32-36 weeks gestation |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
<0.05000000 |
1.910 |
Gibson et al., 2008
|
CP |
Girls |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
0.02000000 |
1.630 |
Mei et al., 2021
|
CP |
None |
KCNQ2
|
-0.67 |
rs118192203
|
G |
A |
SNV |
None |
None |
Harteman et al., 2013
|
NESHIE |
White matter/watershed brain injury |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
<0.05000000 |
9.900 |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia, neonatal lung disease, developmental delay, mild periventricular leukomalacia |
COL4A1
|
-2.82 |
NM_001845.6:c.4856G>A
|
C |
T |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Developmental delay |
KANK1
|
-0.92 |
NM_153186.5:c.3290C>T
|
C |
T |
SNV |
None |
None |
Parobek et al., 2024
|
NESHIE |
None |
KIF1A
|
-3.67 |
rs672601369
|
C |
T |
SNV |
None |
None |
Bi et al., 2014
|
CP |
None |
IL6
|
0.73 |
rs2069833
|
C |
T |
SNV |
0.05000000 |
2.400 |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia, possible periventricular leukomalacia |
DYNC2H1
|
-0.35 |
NM_001080463:c.G5158A
|
G |
A |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845:c.3371G>A
|
C |
T |
SNV |
None |
None |
Mei et al., 2021
|
CP |
None |
KCNQ2
|
-0.67 |
rs772800738
|
T |
A |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
GNAO1
|
-0.74 |
NM_020988.3:c.164T>A
|
T |
A |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
|
KANK1
|
-0.92 |
NM_153186.5:c.3569G>A
|
G |
A |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic diplegia, seizures, periventricular leukomalacia |
EIF4E2
|
-0.34 |
NM_001276336.1:c.214C>G
|
C |
G |
SNV |
None |
None |
van Eyk et al., 2021
|
CP |
None |
CFTR
|
-0.51 |
rs113993960
|
CTT |
- |
DEL |
None |
None |
van Eyk et al., 2019
|
CP |
Female, born 40 weeks, father’s second cousin CP, asthma and eczema. |
KIF1A
|
-3.67 |
rs375509312
|
G |
A |
SNV |
None |
None |
Vasconcellos et al., 2023
|
CP |
Progressive gait disorder and generalised involuntary movement |
GNAO1
|
-0.74 |
rs1085307876
|
G |
A |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
SCN1A
|
-1.43 |
NM_001165963:c.4547C>A
|
G |
T |
SNV |
None |
None |
Hou et al., 2016
|
CP |
None |
MTHFR
|
0.09 |
rs9651118
|
T |
C |
SNV |
0.00200000 |
None |
Bi et al., 2014
|
CP |
None |
IL6
|
0.73 |
rs1554606
|
T |
G |
SNV |
0.00700000 |
2.500 |
Kuzmanic Samija et al., 2014
|
NESHIE |
Moderate and severe brain injury |
NOS3
|
-1.10 |
rs1808593
|
G |
T |
SNV |
0.01500000 |
12.360 |
Wu et al., 2016
|
NESHIE |
Apgar scores |
NOS3
|
-1.10 |
rs2070744
|
C |
T |
SNV |
0.00600000 |
22.206 |
van Eyk et al., 2019
|
CP |
None |
DYNC2H1
|
-0.35 |
NM_001080463.1:c.5492A>G
|
A |
G |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
GNAO1
|
-0.74 |
NM_020988:c.724-8G>A
|
G |
A |
SNV |
None |
None |
Kremer and Grosso, 2004
|
NESHIE |
Associated with increased levels of plasma homocysteine after methionine loading in mothers of CP patients |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
<0.05000000 |
None |
Fehlings et al., 2024
|
CP |
Spastic quadriplegia with periventricular haemorrhagic infarction on MRI, congenital malformation, intrauterine growth restriction, intrapartum birth asphyxia |
COL4A1
|
-2.82 |
NM_001845.6:c.1537-1G>A
|
C |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
GNAO1
|
-0.74 |
NM_020988:c.626G>A
|
G |
A |
SNV |
None |
None |
Esih et al., 2021
|
NESHIE |
posterior limb of internal capsule damage |
IL1B
|
-0.38 |
rs16944
|
A |
G |
SNV |
0.04000000 |
3.710 |
May et al., 2021
|
CP |
Birth asphyxiia, intravascular hemorrhage; right side hemiparesis, spasticity, dystonia |
GNAO1
|
-0.74 |
NM_138736.3:c.662C>A
|
C |
A |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845:c.3715G>A
|
C |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
KIF1A
|
-3.67 |
rs879253888
|
G |
A |
SNV |
None |
None |
Calkavur et al., 2011
|
NESHIE |
Negative neurological findings |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.04000000 |
None |
Gibson et al., 2007
|
CP |
Protective for preterm birth |
NOS3
|
-1.10 |
rs1800779
|
G |
A |
SNV |
0.01200000 |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
PHIP
|
-1.24 |
NM_017934.7:c.3782+2AAGT>-
|
None |
None |
None |
None |
None |
May et al., 2021
|
CP |
Birth asphyxia; spastic quadriparesis, left-sided hemiparesis |
COL4A1
|
-2.82 |
NM_001845:c.2263G>A
|
C |
T |
SNV |
None |
None |
Calkavur et al., 2011
|
NESHIE |
Abnormal electroencephalogram |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.04000000 |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs1554286
|
A |
T |
SNV |
0.03900000 |
None |
Hou et al., 2016
|
CP |
None |
TNF
|
-0.03 |
rs1799724
|
C |
T |
SNV |
0.03400000 |
None |
van Eyk et al., 2019
|
CP |
Male, spastic quad, born 40 weeks, partial dysgenesis of corpus callosum, global DD, Ep (first seizure at 12 months), optic atrophy (cortically blind); type 1 diabetes, scoliosis in the lumbar region and an oblique pelvis, incontinent of faeces and urine, cortical atrophy has been progressive. |
KIF1A
|
-3.67 |
rs387906799
|
G |
A |
SNV |
None |
None |
Woodward et al., 2023
|
NESHIE |
None |
CDKL5
|
-0.67 |
CDKL5:c.2388_2404DEL
|
None |
None |
DEL |
None |
None |
Gabriel et al., 2016
|
NESHIE |
Periventricular leukomalacia |
IL1B
|
-0.38 |
rs16944
|
A |
G |
SNV |
0.00300000 |
23.120 |
Kuzmanic Samija et al., 2014
|
NESHIE |
Low Apgar scores |
NOS3
|
-1.10 |
rs1808593
|
G |
T |
SNV |
0.01500000 |
10.400 |
Moreno-De-Luca et al., 2021
|
CP |
None |
SMARCB1
|
-0.34 |
NM_00307:c.110G>A
|
None |
None |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
KIF1A
|
-3.67 |
rs1553638614
|
C |
T |
SNV |
None |
None |
Esih et al., 2021_2
|
NESHIE |
Higher epilepsy risk only in carriers of at least one polymorphic CARD8 rs2043211 |
IL1B
|
-0.38 |
rs16944
|
A |
G |
SNV |
0.04400000 |
13.330 |
Chen et al., 2019
|
NESHIE |
None |
AGT
|
0.49 |
rs2067853
|
G |
A |
SNV |
0.04300000 |
None |
Gabriel et al., 2016
|
NESHIE |
Reduced periventricular leukomalacia risk |
IL10
|
0.04 |
rs1800896
|
T |
C |
SNV |
0.03000000 |
0.510 |
Wang et al., 2024
|
CP |
None |
GNAO1
|
-0.74 |
NM_138736.3:c.788C>T
|
C |
T |
SNV |
None |
None |
Esih et al., 2021
|
NESHIE |
Protective against cortex damage |
CARD8
|
1.18 |
rs2043211
|
A |
T |
SNV |
0.03100000 |
0.150 |
Moreno-De-Luca et al., 2021
|
CP |
None |
ZDHHC9
|
-0.12 |
NM_016032.4:c.777+1G>A
|
C |
T |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia, periventricular leukomalacia |
COL4A1
|
-2.82 |
NM_001303110.1:c.136G>A
|
C |
T |
SNV |
None |
None |
Thys et al., 2024
|
CP |
Spastic diplegia, epilepsy, Intellectual disability, Developmental disorder |
KIF1A
|
-3.67 |
NM_001244008.2:c.641G>C
|
C |
G |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
SCN1A
|
-1.43 |
NM_001165963:c.4441G>A
|
C |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
KIF1A
|
-3.67 |
rs1553639041
|
G |
T |
SNV |
None |
None |
Mei et al., 2021
|
CP |
None |
KCNQ2
|
-0.67 |
NM_172107.4:c.2326delC
|
CG |
C |
DEL |
None |
None |
Esih et al., 2021_2
|
NESHIE |
Lower epilepsy risk in carriers of two normal IL1B rs16944 alleles |
CARD8
|
1.18 |
rs2043211
|
A |
T |
SNV |
0.01900000 |
0.030 |
Kremer and Grosso, 2004
|
NESHIE |
Associated with mothers of affected children with CP |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
<0.05000000 |
None |
Gibson et al., 2008
|
CP |
Girls |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
0.00900000 |
1.740 |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia |
COL4A1
|
-2.82 |
NM_001845.6:c.4516A>G
|
T |
C |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
GNAO1
|
-0.74 |
NM_020988:c.470T>C
|
T |
C |
SNV |
None |
None |
Matthews et al., 2019
|
CP |
Intellectual disability, evidence of findings not typical of classical CP (stroke, brain iron accumulation, atypical white matter lesions of other structural findings) |
GNAO1
|
-0.74 |
rs79704487
|
G |
T |
SNV |
None |
None |
Pavelekova et al., 2023
|
CP |
None |
AUTS2
|
-1.97 |
rs1585653240
|
A |
C |
SNV |
None |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs3024490
|
A |
T |
SNV |
0.02700000 |
None |
Wu et al., 2009
|
CP |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.02000000 |
1.600 |
Gabriel et al., 2016
|
NESHIE |
Periventricular leukomalacia |
IL1B
|
-0.38 |
rs16944
|
A |
G |
SNV |
0.00300000 |
23.120 |
Moreno-De-Luca et al., 2021
|
CP |
None |
SCN1A
|
-1.43 |
NM_001165963:c.2628A>T
|
T |
A |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
AUTS2
|
-1.97 |
NM_015570:c.1297_1300CCT
|
None |
None |
None |
None |
None |
Thys et al., 2024
|
CP |
Developmental disorder, axial hypotonia, Intellectual disability, quadriplegia |
GNAO1
|
-0.74 |
rs797044951
|
G |
A |
SNV |
None |
None |
Thys et al., 2024
|
CP |
Spastic hemiplegia, congenital cataract, vision problems, Intellectual disability, epilepsy, Autism spectrum disorder |
COL4A1
|
-2.82 |
rs2139162750
|
C |
T |
SNV |
None |
None |
Chopra et al., 2022
|
CP |
Spastic, non-cryptogenic (predefined risk factors) |
COL4A1
|
-2.82 |
NM_001845.4:c.443G>A
|
C |
T |
SNV |
None |
None |
Esih et al., 2021
|
NESHIE |
Moderate to severe magnetic resonance imaging presentation |
IL1B
|
-0.38 |
rs1143623
|
C |
G |
SNV |
0.04000000 |
3.780 |
van Eyk et al., 2021
|
CP |
Spastic quadriplegia, seizures, epilepsy, developmental delay |
SCN1A
|
-1.43 |
NM_001165963.4:c.2522C>T
|
C |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
PTPN11
|
-0.43 |
rs397507520
|
G |
C |
SNV |
None |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs1518111
|
T |
C |
SNV |
0.01800000 |
None |
Cheng et al., 2011
|
CP |
Mental retardation |
MTHFR
|
0.09 |
rs1801131
|
T |
G |
SNV |
0.01400000 |
None |
Woodward et al., 2023
|
NESHIE |
None |
SCN9A
|
0.33 |
SCN9A:c.4652G>A
|
None |
None |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
GNAO1
|
-0.74 |
NM_020988:c.736G>A
|
G |
A |
SNV |
None |
None |
Sun et al., 2019
|
CP |
NESHIE |
OLIG2
|
None |
rs6517135
|
T |
C |
SNV |
0.00300000 |
0.558 |
Woodward et al., 2023
|
NESHIE |
None |
KCNQ2
|
-0.67 |
rs727503974
|
G |
A |
SNV |
None |
None |
Gabriel et al., 2016
|
NESHIE |
Reduced periventricular leukomalacia risk |
IL1B
|
-0.38 |
rs16944
|
A |
G |
SNV |
0.00300000 |
0.043 |
Woodward et al., 2023
|
NESHIE |
None |
KIF1A
|
-3.67 |
rs373882732
|
C |
G |
SNV |
None |
None |
Esih et al., 2021
|
NESHIE |
Protective against brainstem damage |
CARD8
|
1.18 |
rs2043211
|
A |
T |
SNV |
0.02000000 |
0.070 |
Sun et al., 2019
|
CP |
NESHIE |
OLIG2
|
None |
rs6517135
|
T |
C |
SNV |
0.00700000 |
None |
Gabriel et al., 2016
|
NESHIE |
Periventricular leukomalacia |
TNF
|
-0.03 |
rs1799964
|
T |
C |
SNV |
0.04400000 |
2.471 |
Wu et al., 2011
|
CP |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.00200000 |
1.720 |
May et al., 2021
|
CP |
Birth asphyxia, intravascular stroke/hemorrhage; spastic bilateral CP |
SCN1A
|
-1.43 |
NM_006920.6:c.2492_2495delGTTC
|
GTTC |
- |
SNV |
None |
None |
Mei et al., 2021
|
CP |
None |
CDKL5
|
-0.67 |
NM_003159.3:c.1730_1731dupTG
|
A |
ATG |
INS |
None |
None |
Fehlings et al., 2024
|
CP |
Unspecified CP Subtype, Down Syndrome, normal MRI, congenital malformation, prenatal growth restriction, intrapartum birth asphyxia, intrauterine infection, multiple fetuses, prolonged preterm premature rupture of membrane, family history of CP, prematurity |
AUTS2
|
-1.97 |
NM_015570.4:c.690+63379A>G
|
A |
G |
SNV |
None |
None |
Wu et al., 2009
|
CP |
Controlling for race; male sex |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.02000000 |
1.500 |
Thys et al., 2024
|
CP |
Spastic diplegia, Developmental disorder, Intellectual disability, behavior |
KIF1A
|
-3.67 |
rs797045050
|
C |
T |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
AUTS2
|
-1.97 |
NM_015570.4:c.1864_1865insCTGGCCGGCAACGGCACGACGACCGGCACCGCGCGCTATCGCGGCGACAACCTGCTCGACATGAATACGCGCGCGCTGAACGCGGT
|
G |
CTGGCCGGCAACGGCACGACGACCGGCACCGCGCGCTATCGCGGCGACAACCTGCTCGACATGAATACGCGCGCGCTGAACGCGGT |
INS |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic/dystonic diplegia, neonatal encephalopathy, developmental delay, seizure, cerebral oedema |
KANK1
|
-0.92 |
NM_153186.5:c.2398G>A
|
G |
A |
SNV |
None |
None |
van Eyk et al., 2021
|
CP |
Spastic hemiplegia |
COL4A1
|
-2.82 |
NM_001845.6:c.4114G>C
|
C |
G |
SNV |
None |
None |
Bi et al., 2014
|
CP |
Periventricular leukomalacia |
IL6
|
0.73 |
rs1800796
|
G |
C |
SNV |
0.04200000 |
None |
Gibson et al., 2006
|
CP |
Hemiplegia, gestational age < 32 weeks |
TNF
|
-0.03 |
rs1800629
|
G |
A |
SNV |
0.03000000 |
2.380 |
van Eyk et al., 2019
|
CP |
Spastic quadriplegia, diagnosed neonatal encephalopathy, watershed and cerebral cortex brain injury |
DYNC2H1
|
-0.35 |
NM_001377:c.A9862T
|
A |
T |
SNV |
None |
None |
Calkavur et al., 2011
|
NESHIE |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
None |
4.180 |
Hou et al., 2016
|
CP |
None |
TNF
|
-0.03 |
rs361525
|
G |
A |
SNV |
0.00700000 |
None |
van Eyk et al., 2019
|
CP |
Spastic quadriplegia with generalised hypotonia, dystonic posture, intellectual disability, epilepsy, periventricular leukomalacia |
COL4A1
|
-2.82 |
NM_001845.6:c.2413G>A
|
C |
T |
SNV |
None |
None |
Chen et al., 2013
|
CP |
Spastic tetraplegia in males |
IL6
|
0.73 |
rs2069837
|
A |
G |
SNV |
0.03500000 |
1.580 |
Wu et al., 2011
|
CP |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
<0.00100000 |
1.790 |
May et al., 2021
|
CP |
Birth asphyxia; spastic |
SMARCB1
|
-0.34 |
NM_003073.5:c.1121G>A
|
G |
A |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic diplegia, mild dystonia, epilepsy, developmental delay |
DYNC2H1
|
-0.35 |
NM_001080463.1:c.6916T>C
|
T |
C |
SNV |
None |
None |
Almansa et al., 2024
|
CP |
None |
GNAO1
|
-0.74 |
rs886039494
|
C |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
KIF1A
|
-3.67 |
rs672601370
|
G |
A |
SNV |
None |
None |
Varner et al., 2023
|
CP |
Associated with the combined outcome of CP or death |
IL1B
|
-0.38 |
rs3136558
|
A |
G |
SNV |
0.00270000 |
None |
Xia et al., 2018
|
CP |
Spastic tetraplegia |
IL10
|
0.04 |
rs1800896
|
T |
C |
SNV |
0.03000000 |
None |
van Eyk et al., 2021
|
CP |
Spastic quadriplegia, seizures, epilepsy, developmental delay |
SCN1A
|
-1.43 |
NM_001165963.4: c.2522C>T
|
C |
T |
SNV |
None |
None |
Bi et al., 2016
|
CP |
None |
COL4A1
|
-2.82 |
rs1411040
|
C |
T |
SNV |
0.04850000 |
1.746 |
Fehlings et al., 2024
|
CP |
Spastic diplegic CP with normal MRI, intrapartum birth asphyxia, maternal illness: first and second trimester, vaginal bleeding |
GNAO1
|
-0.74 |
NM_138736.3:c.711A>C
|
A |
C |
SNV |
None |
None |
Pingel et al., 2018
|
CP |
None |
COL4A4
|
1.04 |
rs190148408
|
G |
C |
SNV |
None |
None |
Mei et al., 2021
|
CP |
None |
SCN1A
|
-1.43 |
NM_001165963.4:c.4529C>T
|
G |
A |
SNV |
None |
None |
van Eyk et al., 2021
|
CP |
Asymmetric spastic diplegia, developmental delay, seizures |
COL4A1
|
-2.82 |
NM_001303110.2:c.1258G>A
|
C |
T |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic/dystonic quadriplegia |
KANK1
|
-0.92 |
NM_153186.5:c.3005G>A
|
G |
A |
SNV |
None |
None |
Wang et al., 2024
|
CP |
None |
CDKL5
|
-0.67 |
rs267608433
|
GAAA |
- |
SNV |
None |
None |
Woodward et al., 2023
|
NESHIE |
Cystic fibrosis confirmed in patient following genetic testing |
CFTR
|
-0.51 |
rs113993960
|
CTT |
- |
DEL |
None |
None |
Wu et al., 2009
|
CP |
Caucasian |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.03000000 |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845:c.3497G>A
|
C |
T |
SNV |
None |
None |
McMichael et al., 2015
|
CP |
NESHIE |
EIF4E2
|
-0.34 |
NM_004846:c.214C>G
|
C |
G |
SNV |
None |
None |
Pavlov, et al., 2023
|
NESHIE |
Higher risk of more severe magnetic resonance imaging findings |
NOS2
|
-1.68 |
rs1137933
|
G |
A |
SNV |
0.02800000 |
7.100 |
Moreno-De-Luca et al., 2021
|
CP |
None |
COL4A1
|
-2.82 |
NM_001845:c.2086G>A
|
C |
T |
SNV |
None |
None |
Moreno-De-Luca et al., 2021
|
CP |
None |
AUTS2
|
-1.97 |
rs1554480537
|
C |
T |
SNV |
None |
None |
Gabriel et al., 2016
|
NESHIE |
Periventricular leukomalacia |
TNF
|
-0.03 |
rs1799964
|
T |
C |
SNV |
0.04300000 |
2.495 |
Calkavur et al., 2011
|
NESHIE |
None |
IL6
|
0.73 |
rs1800795
|
C |
G |
SNV |
0.00200000 |
None |
Parobek et al., 2024
|
NESHIE |
None |
PTPN11
|
-0.43 |
rs397507545
|
G |
A |
SNV |
None |
None |
van Eyk et al., 2019
|
CP |
Spastic hemiplegia, periventricular leukomalacia |
COL4A1
|
-2.82 |
NM_001303110.1:c.136G>A
|
C |
T |
SNV |
None |
None |
Pavelekova et al., 2023
|
CP |
None |
PANK2
|
-0.23 |
NM_153638.2:c.735dup
|
C |
CT |
DUP |
None |
None |
Gibson et al., 2005
|
CP |
Diplegia |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
<0.05000000 |
1.580 |
Gibson et al., 2005
|
CP |
32-36 weeks gestation |
MTHFR
|
0.09 |
rs1801133
|
G |
A |
SNV |
<0.05000000 |
2.550 |
Bi et al., 2014
|
CP |
Premature rupture of membrane |
IL6
|
0.73 |
rs1800796
|
G |
C |
SNV |
0.00180000 |
None |